Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANW25608.1Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
ANW26450.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.919
ANW22904.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
ANW26453.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.879
ANW25607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.852
BA953_01070
ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.840
ANW26451.1
Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.838
BA953_23235
Acriflavin resistance protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.833
BA953_20835
Acriflavin resistance protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.782
ANW26904.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.781
ANW23728.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.775
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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