Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANW25609.1Adhesin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1892 aa)    
Predicted Functional Partners:
ANW26298.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.739
ANW26297.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.736
ANW25638.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
ANW25326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.682
ANW26716.1
Trypsin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.677
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.575
ANW24217.1
Lex2B protein (lipooligosaccharide 5G8 epitope biosynthesis-associated protein); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
guaC
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
  
  
  0.461
ANW24164.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.444
rsmH
16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.444
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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