STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW25781.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (522 aa)    
Predicted Functional Partners:
ANW23472.1
Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.626
ANW24766.1
Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.626
ANW26327.1
Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.621
ANW24204.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.591
ANW23736.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.573
ANW27202.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.560
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.559
ANW26506.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.485
ANW26509.1
Alkaline protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.485
ANW26748.1
Alkaline serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
   
 
 0.485
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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