STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcAChloride channel protein; Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response. Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily. (466 aa)    
Predicted Functional Partners:
ANW25906.1
Tellurium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
ANW24040.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.495
ANW25907.1
CAI-1 autoinducer synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.436
ANW23745.1
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.429
ANW24886.1
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.429
ANW25542.1
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.429
ANW25992.1
Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.429
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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