STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutWPutative heme utilization radical SAM enzyme HutW; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
ANW26146.1
HuvX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
ANW26947.1
Outer membrane protein OmpW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.877
hutZ
Heme utilization protein HutZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.723
ANW27337.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.678
ANW26148.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.666
ANW26149.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
ccoN
Cytochrome c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.643
ppk2
Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.601
hmuV
Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
     
 0.594
ANW26150.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.580
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.