Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANW26738.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
ANW26723.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.706
xdhC
Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.656
xdhB
Xanthine dehydrogenase molybdopterin binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.633
xdhA
Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.622
uraD
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.557
prmB
Ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.550
IlvH
Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.516
uraH
Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.507
ANW26727.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.477
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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