Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANW26912.1Peptidase M3; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)    
Predicted Functional Partners:
ANW26417.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
ANW25402.1
Lipase chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
ANW26412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.619
ANW26413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.601
ANW22898.1
CesD/SycD/LcrH family type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
ANW27282.1
Thermolabile hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
ANW26804.1
Siderophore ferric iron reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
ANW27328.1
Major facilitator superfamily transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.571
ANW26415.1
Peptidase M9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.554
ANW27283.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.550
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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