STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BA953_23235Acriflavin resistance protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
ANW27040.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
ANW25511.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.778
ANW23018.1
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.713
ANW25608.1
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.713
ANW26344.1
Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.620
ANW23052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
ANW23386.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
TolC
Outer membrane channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
BA953_01070
ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.574
ANW23729.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.574
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.