STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BA953_24035Chemotaxis protein CheC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)    
Predicted Functional Partners:
ANW24140.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.896
ANW27316.1
Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.885
ANW25967.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.846
ANW23551.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.765
ANW24661.1
MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
ANW24517.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.731
ANW25722.1
Flagellar basal-body protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
ANW24658.1
MSHA biogenesis protein MshB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
ANW24650.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
ANW25744.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.673
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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