Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BA953_24305Ammonium transporter; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (537 aa)    
Predicted Functional Partners:
ANW27241.1
Oxalate:formate antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
ANW26642.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.717
ANW26709.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
ANW27239.1
9-hexadecenoic acid cis-trans isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
ANW24418.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
ANW27348.1
Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.435
ANW25781.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.424
ANW26842.1
DUF1566 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.424
ANW27077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.424
ANW27078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.424
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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