STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BA953_24400Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)    
Predicted Functional Partners:
ANW27256.1
Type VI secretion system ImpA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.898
ANW27259.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.790
ANW26412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.735
ANW26413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.724
ANW24969.1
TIGR03503 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.703
ANW27257.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.703
ANW23032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.698
ANW27266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.697
ANW27258.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.690
ANW22887.1
EscD/YscD/HrpQ family type III secretion system inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.654
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.