STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQZ60519.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
AQZ60520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
AQZ70476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.793
AQZ68451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.713
AQZ65065.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.662
AQZ63051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.655
AQZ63171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.646
AQZ64931.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
AQZ60347.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.613
AQZ65728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
AQZ69350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.607
Your Current Organism:
Nonomuraea sp. ATCC 55076
NCBI taxonomy Id: 1909395
Other names: N. sp. ATCC 55076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.