STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002148795_01470Unannotated protein. (872 aa)    
Predicted Functional Partners:
GCA_002148795_01801
Unannotated protein.
  
 0.921
GCA_002148795_01598
Unannotated protein.
    
 0.841
GCA_002148795_01469
Unannotated protein.
 
    
0.840
GCA_002148795_01225
Unannotated protein.
 
 
 0.835
GCA_002148795_03166
Unannotated protein.
 
 0.787
GCA_002148795_00754
Unannotated protein.
     
 0.768
GCA_002148795_02808
Unannotated protein.
 
  
 0.761
GCA_002148795_00901
Unannotated protein.
     
 0.754
GCA_002148795_00114
Unannotated protein.
  
 
 0.746
GCA_002148795_02225
Unannotated protein.
  
 
 0.746
Your Current Organism:
Oceanibaculum nanhaiense
NCBI taxonomy Id: 1909734
Other names: KCTC 52312, MCCC 1A05150, O. nanhaiense, Oceanibaculum nanhaiense Du et al. 2017, Oceanibaculum sp. L54-1-50, Oceanibaculum sp. MCCC 1A05150, strain L54-1-50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.