STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002148795_01614Unannotated protein. (429 aa)    
Predicted Functional Partners:
GCA_002148795_02790
Unannotated protein.
 
 0.997
GCA_002148795_03416
Unannotated protein.
 
 
 0.992
GCA_002148795_00253
Unannotated protein.
  
 0.975
GCA_002148795_03414
Unannotated protein.
 
  
 0.957
GCA_002148795_02974
Unannotated protein.
 
 
 0.923
GCA_002148795_02470
Unannotated protein.
  
  
 0.896
GCA_002148795_02434
Unannotated protein.
    
 0.887
GCA_002148795_02793
Unannotated protein.
  
 0.887
GCA_002148795_02511
Unannotated protein.
  
 
 0.881
GCA_002148795_00318
Unannotated protein.
  
 
 0.861
Your Current Organism:
Oceanibaculum nanhaiense
NCBI taxonomy Id: 1909734
Other names: KCTC 52312, MCCC 1A05150, O. nanhaiense, Oceanibaculum nanhaiense Du et al. 2017, Oceanibaculum sp. L54-1-50, Oceanibaculum sp. MCCC 1A05150, strain L54-1-50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.