STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL38194.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
SEL38109.1
Hypothetical protein.
       0.773
SEL38151.1
Collagen triple helix repeat-containing protein.
       0.773
SEL38001.1
Hypothetical protein.
       0.757
SEL38042.1
Collagen triple helix repeat-containing protein.
       0.757
SEL38075.1
Hypothetical protein.
       0.757
SEL38235.1
Hypothetical protein.
       0.413
SEL38274.1
Hypothetical protein.
       0.413
SEL38321.1
Hypothetical protein.
       0.413
Your Current Organism:
Methanobrevibacter gottschalkii
NCBI taxonomy Id: 190974
Other names: DSM 11977, M. gottschalkii, Methanobrevibacter gottschalkii Miller and Lin 2002, OCM 813, strain HO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.