Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL07494.1 | SEL08838.1 | SAMN05216439_1894 | SAMN05216439_1927 | NADH oxidase (H2O2-forming). | Major Facilitator Superfamily protein. | 0.505 |
SEL07494.1 | SEL08978.1 | SAMN05216439_1894 | SAMN05216439_1931 | NADH oxidase (H2O2-forming). | Glutathione reductase (NADPH). | 0.713 |
SEL08802.1 | SEL08838.1 | SAMN05216439_1926 | SAMN05216439_1927 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.541 |
SEL08802.1 | SEL08877.1 | SAMN05216439_1926 | SAMN05216439_1928 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.584 |
SEL08838.1 | SEL07494.1 | SAMN05216439_1927 | SAMN05216439_1894 | Major Facilitator Superfamily protein. | NADH oxidase (H2O2-forming). | 0.505 |
SEL08838.1 | SEL08802.1 | SAMN05216439_1927 | SAMN05216439_1926 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.541 |
SEL08838.1 | SEL08877.1 | SAMN05216439_1927 | SAMN05216439_1928 | Major Facilitator Superfamily protein. | DNA-binding transcriptional regulator, MarR family. | 0.771 |
SEL08838.1 | SEL08916.1 | SAMN05216439_1927 | SAMN05216439_1929 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.506 |
SEL08838.1 | SEL08978.1 | SAMN05216439_1927 | SAMN05216439_1931 | Major Facilitator Superfamily protein. | Glutathione reductase (NADPH). | 0.449 |
SEL08838.1 | SEL22233.1 | SAMN05216439_1927 | SAMN05216439_0194 | Major Facilitator Superfamily protein. | Phosphoenolpyruvate mutase. | 0.519 |
SEL08838.1 | argD | SAMN05216439_1927 | SAMN05216439_1474 | Major Facilitator Superfamily protein. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.439 |
SEL08838.1 | asd | SAMN05216439_1927 | SAMN05216439_1385 | Major Facilitator Superfamily protein. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.452 |
SEL08838.1 | mfnA | SAMN05216439_1927 | SAMN05216439_0825 | Major Facilitator Superfamily protein. | Tyrosine decarboxylase / aspartate 1-decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.551 |
SEL08838.1 | ndk | SAMN05216439_1927 | SAMN05216439_0953 | Major Facilitator Superfamily protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.438 |
SEL08877.1 | SEL08802.1 | SAMN05216439_1928 | SAMN05216439_1926 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.584 |
SEL08877.1 | SEL08838.1 | SAMN05216439_1928 | SAMN05216439_1927 | DNA-binding transcriptional regulator, MarR family. | Major Facilitator Superfamily protein. | 0.771 |
SEL08877.1 | SEL08916.1 | SAMN05216439_1928 | SAMN05216439_1929 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.519 |
SEL08877.1 | SEL08978.1 | SAMN05216439_1928 | SAMN05216439_1931 | DNA-binding transcriptional regulator, MarR family. | Glutathione reductase (NADPH). | 0.516 |
SEL08916.1 | SEL08838.1 | SAMN05216439_1929 | SAMN05216439_1927 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.506 |
SEL08916.1 | SEL08877.1 | SAMN05216439_1929 | SAMN05216439_1928 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.519 |
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