rpmB_1 protein (Streptomyces griseus) - STRING interaction network

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Score

rpmB_1

Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)

Predicted Functional Partners:

rpmF

0.985

rpmG2_1

0.980

rpsN

0.978

rpmE

0.977

rpmJ

0.977

rpsQ

0.976

rpsO

0.971

rplS

0.970

rpsP

0.970

rplM

0.970

Your Current Organism:

Streptomyces griseus

NCBI taxonomy Id: 1911
Other names: ATCC 23345, ATCC 23921, ATCC 25497 [[Streptomyces setonii]], ATCC 27732 [[Streptomyces cavourensis subsp. washingtonensis]], Actinomyces griseus, Actinomyces setonii, BCRC 13478, CBS 105.27 [[Streptomyces setonii]], CBS 905.68, CBS 957.69 [[Streptomyces setonii]], CCRC 13478, CCRC:13478, CCT 4836, CCUG 11104, CECT 3330, CFBP 4546, CFBP 4549 [[Streptomyces setonii]], CIP 105124, CIP 105279 [[Streptomyces setonii]], DSM 40236, DSM 40395 [[Streptomyces setonii]], DSM 41423 [[Streptomyces cavourensis subsp. washingtonensis]], HAMBI 2315, ICMP 12543 [[Streptomyces setonii]], IFO 12875, IFO 13085 [[Streptomyces setonii]], IFO 15391 [[Streptomyces cavourensis subsp. washingtonensis]], IFO 15744, ISP 5236, JCM 4047, JCM 4226 [[Streptomyces setonii]], JCM 4516 [[Streptomyces setonii]], JCM 4644, JCM 4967 [[Streptomyces cavourensis subsp. washingtonensis]], KACC 20084, KCC S-0967 [[Streptomyces cavourensis subsp. washingtonensis]], KCTC 9080, KCTC 9135, KCTC 9144 [[Streptomyces setonii]], LMG 19302, LMG:19302, NBRC 12875, NBRC 13085 [[Streptomyces setonii]], NBRC 15391 [[Streptomyces cavourensis subsp. washingtonensis]], NBRC 15744, NCIMB 13023, NCTC 13033, NRRL B-2555 [[Streptomyces setonii]], NRRL B-2682, NRRL B-8030 [[Streptomyces cavourensis subsp. washingtonensis]], NRRL-ISP 5236, NRRL-ISP 5395 [[Streptomyces setonii]], PCM 2331, S. griseus, Streptomyces cavourensis subsp. washingtonensis, Streptomyces setonii, Streptomyces sp. AP19-1, Streptomyces sp. AP19-2, Streptomyces sp. DSM 40932, Streptomyces sp. WXC19-1, VKM Ac-800, strain AUW-83 [[Streptomyces cavourensis subsp. washingtonensis]]

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplS	GCA_001715295_02260	GCA_001715295_01452	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.996
rplM	rpmB_1	GCA_001715295_02260	GCA_001715295_01482	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.	0.970
rplM	rpmE	GCA_001715295_02260	GCA_001715295_01727	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Binds the 23S rRNA.	0.953
rplM	rpmF	GCA_001715295_02260	GCA_001715295_01475	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.967
rplM	rpmG2_1	GCA_001715295_02260	GCA_001715295_02345	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.	0.961
rplM	rpmJ	GCA_001715295_02260	GCA_001715295_02269	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family.	0.987
rplM	rpsN	GCA_001715295_02260	GCA_001715295_02280	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.975
rplM	rpsO	GCA_001715295_02260	GCA_001715295_01363	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsP	GCA_001715295_02260	GCA_001715295_01456	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.991
rplM	rpsQ	GCA_001715295_02260	GCA_001715295_02284	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.994
rplS	rplM	GCA_001715295_01452	GCA_001715295_02260	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.996
rplS	rpmB_1	GCA_001715295_01452	GCA_001715295_01482	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.	0.970
rplS	rpmE	GCA_001715295_01452	GCA_001715295_01727	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Binds the 23S rRNA.	0.955
rplS	rpmF	GCA_001715295_01452	GCA_001715295_01475	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.971
rplS	rpmG2_1	GCA_001715295_01452	GCA_001715295_02345	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.	0.955
rplS	rpmJ	GCA_001715295_01452	GCA_001715295_02269	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family.	0.983
rplS	rpsN	GCA_001715295_01452	GCA_001715295_02280	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.957
rplS	rpsO	GCA_001715295_01452	GCA_001715295_01363	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplS	rpsP	GCA_001715295_01452	GCA_001715295_01456	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplS	rpsQ	GCA_001715295_01452	GCA_001715295_02284	Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.990

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