Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001715295_01640 | GCA_001715295_01947 | GCA_001715295_01640 | GCA_001715295_01947 | Unannotated protein. | Unannotated protein. | 0.691 |
GCA_001715295_01640 | GCA_001715295_03248 | GCA_001715295_01640 | GCA_001715295_03248 | Unannotated protein. | Unannotated protein. | 0.517 |
GCA_001715295_01640 | GCA_001715295_05534 | GCA_001715295_01640 | GCA_001715295_05534 | Unannotated protein. | Unannotated protein. | 0.504 |
GCA_001715295_01947 | GCA_001715295_01640 | GCA_001715295_01947 | GCA_001715295_01640 | Unannotated protein. | Unannotated protein. | 0.691 |
GCA_001715295_01947 | GCA_001715295_01949 | GCA_001715295_01947 | GCA_001715295_01949 | Unannotated protein. | Unannotated protein. | 0.704 |
GCA_001715295_01947 | GCA_001715295_02490 | GCA_001715295_01947 | GCA_001715295_02490 | Unannotated protein. | Unannotated protein. | 0.728 |
GCA_001715295_01947 | GCA_001715295_03248 | GCA_001715295_01947 | GCA_001715295_03248 | Unannotated protein. | Unannotated protein. | 0.684 |
GCA_001715295_01947 | GCA_001715295_03388 | GCA_001715295_01947 | GCA_001715295_03388 | Unannotated protein. | Unannotated protein. | 0.652 |
GCA_001715295_01947 | GCA_001715295_04976 | GCA_001715295_01947 | GCA_001715295_04976 | Unannotated protein. | Unannotated protein. | 0.655 |
GCA_001715295_01947 | GCA_001715295_05356 | GCA_001715295_01947 | GCA_001715295_05356 | Unannotated protein. | Unannotated protein. | 0.683 |
GCA_001715295_01947 | GCA_001715295_05534 | GCA_001715295_01947 | GCA_001715295_05534 | Unannotated protein. | Unannotated protein. | 0.659 |
GCA_001715295_01947 | sigV | GCA_001715295_01947 | GCA_001715295_01948 | Unannotated protein. | Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.947 |
GCA_001715295_01947 | tatB | GCA_001715295_01947 | GCA_001715295_01945 | Unannotated protein. | Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.747 |
GCA_001715295_01949 | GCA_001715295_01947 | GCA_001715295_01949 | GCA_001715295_01947 | Unannotated protein. | Unannotated protein. | 0.704 |
GCA_001715295_01949 | sigV | GCA_001715295_01949 | GCA_001715295_01948 | Unannotated protein. | Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.704 |
GCA_001715295_01949 | tatB | GCA_001715295_01949 | GCA_001715295_01945 | Unannotated protein. | Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.626 |
GCA_001715295_02490 | GCA_001715295_01947 | GCA_001715295_02490 | GCA_001715295_01947 | Unannotated protein. | Unannotated protein. | 0.728 |
GCA_001715295_02490 | GCA_001715295_03248 | GCA_001715295_02490 | GCA_001715295_03248 | Unannotated protein. | Unannotated protein. | 0.407 |
GCA_001715295_03248 | GCA_001715295_01640 | GCA_001715295_03248 | GCA_001715295_01640 | Unannotated protein. | Unannotated protein. | 0.517 |
GCA_001715295_03248 | GCA_001715295_01947 | GCA_001715295_03248 | GCA_001715295_01947 | Unannotated protein. | Unannotated protein. | 0.684 |
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