Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001715295_03088 | GCA_001715295_03089 | GCA_001715295_03088 | GCA_001715295_03089 | Unannotated protein. | Unannotated protein. | 0.534 |
GCA_001715295_03088 | GCA_001715295_03090 | GCA_001715295_03088 | GCA_001715295_03090 | Unannotated protein. | Unannotated protein. | 0.663 |
GCA_001715295_03088 | GCA_001715295_03092 | GCA_001715295_03088 | GCA_001715295_03092 | Unannotated protein. | Unannotated protein. | 0.614 |
GCA_001715295_03088 | GCA_001715295_03093 | GCA_001715295_03088 | GCA_001715295_03093 | Unannotated protein. | Unannotated protein. | 0.640 |
GCA_001715295_03088 | dapD | GCA_001715295_03088 | GCA_001715295_03364 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.583 |
GCA_001715295_03088 | dapE_3 | GCA_001715295_03088 | GCA_001715295_01956 | Unannotated protein. | Unannotated protein. | 0.578 |
GCA_001715295_03088 | dapF | GCA_001715295_03088 | GCA_001715295_00046 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.554 |
GCA_001715295_03088 | gltB_2 | GCA_001715295_03088 | GCA_001715295_03569 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_001715295_03088 | pyrE | GCA_001715295_03088 | GCA_001715295_03094 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.578 |
GCA_001715295_03088 | speE | GCA_001715295_03088 | GCA_001715295_03091 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.631 |
GCA_001715295_03089 | GCA_001715295_03088 | GCA_001715295_03089 | GCA_001715295_03088 | Unannotated protein. | Unannotated protein. | 0.534 |
GCA_001715295_03089 | GCA_001715295_03090 | GCA_001715295_03089 | GCA_001715295_03090 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_001715295_03090 | GCA_001715295_03088 | GCA_001715295_03090 | GCA_001715295_03088 | Unannotated protein. | Unannotated protein. | 0.663 |
GCA_001715295_03090 | GCA_001715295_03089 | GCA_001715295_03090 | GCA_001715295_03089 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_001715295_03090 | GCA_001715295_03092 | GCA_001715295_03090 | GCA_001715295_03092 | Unannotated protein. | Unannotated protein. | 0.747 |
GCA_001715295_03090 | GCA_001715295_03093 | GCA_001715295_03090 | GCA_001715295_03093 | Unannotated protein. | Unannotated protein. | 0.687 |
GCA_001715295_03090 | pyrE | GCA_001715295_03090 | GCA_001715295_03094 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.634 |
GCA_001715295_03090 | speE | GCA_001715295_03090 | GCA_001715295_03091 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.935 |
GCA_001715295_03092 | GCA_001715295_03088 | GCA_001715295_03092 | GCA_001715295_03088 | Unannotated protein. | Unannotated protein. | 0.614 |
GCA_001715295_03092 | GCA_001715295_03090 | GCA_001715295_03092 | GCA_001715295_03090 | Unannotated protein. | Unannotated protein. | 0.747 |
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