Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001715295_04069 | GCA_001715295_04073 | GCA_001715295_04069 | GCA_001715295_04073 | Unannotated protein. | Unannotated protein. | 0.509 |
GCA_001715295_04069 | mutM_2 | GCA_001715295_04069 | GCA_001715295_04072 | Unannotated protein. | Unannotated protein; Belongs to the FPG family. | 0.538 |
GCA_001715295_04073 | GCA_001715295_04069 | GCA_001715295_04073 | GCA_001715295_04069 | Unannotated protein. | Unannotated protein. | 0.509 |
GCA_001715295_04073 | bioY2 | GCA_001715295_04073 | GCA_001715295_04075 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_001715295_04073 | mutM_2 | GCA_001715295_04073 | GCA_001715295_04072 | Unannotated protein. | Unannotated protein; Belongs to the FPG family. | 0.818 |
bioY2 | GCA_001715295_04073 | GCA_001715295_04075 | GCA_001715295_04073 | Unannotated protein. | Unannotated protein. | 0.538 |
bioY2 | mutM_2 | GCA_001715295_04075 | GCA_001715295_04072 | Unannotated protein. | Unannotated protein; Belongs to the FPG family. | 0.538 |
coaE | mutM_2 | GCA_001715295_03533 | GCA_001715295_04072 | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Unannotated protein; Belongs to the FPG family. | 0.601 |
coaE | polA_1 | GCA_001715295_03533 | GCA_001715295_03540 | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.762 |
dbpA | mutM_2 | GCA_001715295_00020 | GCA_001715295_04072 | Unannotated protein. | Unannotated protein; Belongs to the FPG family. | 0.743 |
dbpA | uvrC | GCA_001715295_00020 | GCA_001715295_03319 | Unannotated protein. | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.505 |
mutM_2 | GCA_001715295_04069 | GCA_001715295_04072 | GCA_001715295_04069 | Unannotated protein; Belongs to the FPG family. | Unannotated protein. | 0.538 |
mutM_2 | GCA_001715295_04073 | GCA_001715295_04072 | GCA_001715295_04073 | Unannotated protein; Belongs to the FPG family. | Unannotated protein. | 0.818 |
mutM_2 | bioY2 | GCA_001715295_04072 | GCA_001715295_04075 | Unannotated protein; Belongs to the FPG family. | Unannotated protein. | 0.538 |
mutM_2 | coaE | GCA_001715295_04072 | GCA_001715295_03533 | Unannotated protein; Belongs to the FPG family. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.601 |
mutM_2 | dbpA | GCA_001715295_04072 | GCA_001715295_00020 | Unannotated protein; Belongs to the FPG family. | Unannotated protein. | 0.743 |
mutM_2 | mutY | GCA_001715295_04072 | GCA_001715295_03302 | Unannotated protein; Belongs to the FPG family. | Unannotated protein. | 0.479 |
mutM_2 | pdg | GCA_001715295_04072 | GCA_001715295_03200 | Unannotated protein; Belongs to the FPG family. | Unannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.628 |
mutM_2 | polA_1 | GCA_001715295_04072 | GCA_001715295_03540 | Unannotated protein; Belongs to the FPG family. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.884 |
mutM_2 | uvrC | GCA_001715295_04072 | GCA_001715295_03319 | Unannotated protein; Belongs to the FPG family. | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.497 |
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