Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001715295_05287 | argC_1 | GCA_001715295_05287 | GCA_001715295_04594 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.995 |
GCA_001715295_05287 | argD_1 | GCA_001715295_05287 | GCA_001715295_04591 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.928 |
GCA_001715295_05287 | argF | GCA_001715295_05287 | GCA_001715295_00246 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.908 |
GCA_001715295_05287 | argG | GCA_001715295_05287 | GCA_001715295_05279 | Unannotated protein. | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.849 |
GCA_001715295_05287 | argH | GCA_001715295_05287 | GCA_001715295_04587 | Unannotated protein. | Unannotated protein. | 0.891 |
GCA_001715295_05287 | argJ | GCA_001715295_05287 | GCA_001715295_04593 | Unannotated protein. | Unannotated protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.991 |
GCA_001715295_05287 | argR | GCA_001715295_05287 | GCA_001715295_04590 | Unannotated protein. | Unannotated protein; Regulates arginine biosynthesis genes. | 0.954 |
GCA_001715295_05287 | rocD | GCA_001715295_05287 | GCA_001715295_02175 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.765 |
GCA_001715295_05288 | argC_1 | GCA_001715295_05288 | GCA_001715295_04594 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.948 |
GCA_001715295_05288 | argD_1 | GCA_001715295_05288 | GCA_001715295_04591 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.739 |
GCA_001715295_05288 | argF | GCA_001715295_05288 | GCA_001715295_00246 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.898 |
GCA_001715295_05288 | argG | GCA_001715295_05288 | GCA_001715295_05279 | Unannotated protein. | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.964 |
GCA_001715295_05288 | argH | GCA_001715295_05288 | GCA_001715295_04587 | Unannotated protein. | Unannotated protein. | 0.919 |
GCA_001715295_05288 | argJ | GCA_001715295_05288 | GCA_001715295_04593 | Unannotated protein. | Unannotated protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.915 |
GCA_001715295_05288 | argR | GCA_001715295_05288 | GCA_001715295_04590 | Unannotated protein. | Unannotated protein; Regulates arginine biosynthesis genes. | 0.844 |
GCA_001715295_05288 | rocD | GCA_001715295_05288 | GCA_001715295_02175 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.739 |
argB | argC_1 | GCA_001715295_04592 | GCA_001715295_04594 | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
argB | argD_1 | GCA_001715295_04592 | GCA_001715295_04591 | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.991 |
argB | argF | GCA_001715295_04592 | GCA_001715295_00246 | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.905 |
argB | argG | GCA_001715295_04592 | GCA_001715295_05279 | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Unannotated protein; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.908 |
page 1 of 6