Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BF14_010815 | GCA_001715295_05376 | GCA_001715295_02018 | GCA_001715295_05376 | Unannotated protein. | Unannotated protein. | 0.952 |
BF14_010815 | dnaK | GCA_001715295_02018 | GCA_001715295_03077 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.722 |
BF14_010815 | pdhD | GCA_001715295_02018 | GCA_001715295_03720 | Unannotated protein. | Unannotated protein. | 0.599 |
BF14_010815 | rpoB | GCA_001715295_02018 | GCA_001715295_02331 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.674 |
BF14_010815 | trxB | GCA_001715295_02018 | GCA_001715295_02871 | Unannotated protein. | Unannotated protein. | 0.912 |
GCA_001715295_02808 | GCA_001715295_05376 | GCA_001715295_02808 | GCA_001715295_05376 | Unannotated protein. | Unannotated protein. | 0.851 |
GCA_001715295_02808 | ctaC | GCA_001715295_02808 | GCA_001715295_03698 | Unannotated protein. | Unannotated protein. | 0.931 |
GCA_001715295_05376 | BF14_010815 | GCA_001715295_05376 | GCA_001715295_02018 | Unannotated protein. | Unannotated protein. | 0.952 |
GCA_001715295_05376 | GCA_001715295_02808 | GCA_001715295_05376 | GCA_001715295_02808 | Unannotated protein. | Unannotated protein. | 0.851 |
GCA_001715295_05376 | ctaC | GCA_001715295_05376 | GCA_001715295_03698 | Unannotated protein. | Unannotated protein. | 0.784 |
GCA_001715295_05376 | dnaK | GCA_001715295_05376 | GCA_001715295_03077 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.805 |
GCA_001715295_05376 | lpd | GCA_001715295_05376 | GCA_001715295_01093 | Unannotated protein. | Unannotated protein. | 0.904 |
GCA_001715295_05376 | lpdA | GCA_001715295_05376 | GCA_001715295_02106 | Unannotated protein. | Unannotated protein. | 0.890 |
GCA_001715295_05376 | msrA | GCA_001715295_05376 | GCA_001715295_02085 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.949 |
GCA_001715295_05376 | pdhD | GCA_001715295_05376 | GCA_001715295_03720 | Unannotated protein. | Unannotated protein. | 0.890 |
GCA_001715295_05376 | rpoB | GCA_001715295_05376 | GCA_001715295_02331 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.798 |
GCA_001715295_05376 | trxB | GCA_001715295_05376 | GCA_001715295_02871 | Unannotated protein. | Unannotated protein. | 0.819 |
ctaC | GCA_001715295_02808 | GCA_001715295_03698 | GCA_001715295_02808 | Unannotated protein. | Unannotated protein. | 0.931 |
ctaC | GCA_001715295_05376 | GCA_001715295_03698 | GCA_001715295_05376 | Unannotated protein. | Unannotated protein. | 0.784 |
dnaK | BF14_010815 | GCA_001715295_03077 | GCA_001715295_02018 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein. | 0.722 |
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