STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API93038.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (77 aa)    
Predicted Functional Partners:
API94303.1
Pantoate--beta-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
API92929.1
2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
API90387.1
biotin--[acetyl-CoA-carboxylase] ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.675
API93311.1
Ketol-acid reductoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.635
API93762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.579
API91560.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.566
API93649.1
Aminodeoxychorismate synthase, component I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.523
API92882.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.506
API92754.1
Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.488
API94078.1
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.488
Your Current Organism:
Virgibacillus sp. 6R
NCBI taxonomy Id: 1911587
Other names: V. sp. 6R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.