API93568.1 protein (Virgibacillus sp. 6R) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

API93568.1

Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)

Predicted Functional Partners:

API93569.1

0.999

API93570.1

0.999

API92239.1

0.998

API92240.1

0.997

API92238.1

0.904

API92478.1

0.764

API91123.1

0.702

API92164.1

0.622

API92038.1

0.610

API90995.1

0.560

Your Current Organism:

Virgibacillus sp. 6R

NCBI taxonomy Id: 1911587
Other names: V. sp. 6R

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
API90995.1	API92239.1	BKP57_03470	BKP57_10585	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
API90995.1	API92240.1	BKP57_03470	BKP57_10590	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
API90995.1	API93568.1	BKP57_03470	BKP57_18175	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
API90995.1	API93569.1	BKP57_03470	BKP57_18180	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
API90995.1	API93570.1	BKP57_03470	BKP57_18185	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
API91123.1	API92239.1	BKP57_04155	BKP57_10585	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
API91123.1	API92240.1	BKP57_04155	BKP57_10590	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
API91123.1	API93568.1	BKP57_04155	BKP57_18175	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
API91123.1	API93569.1	BKP57_04155	BKP57_18180	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
API91123.1	API93570.1	BKP57_04155	BKP57_18185	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
API92038.1	API92238.1	BKP57_09480	BKP57_10580	Manganese ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
API92038.1	API92239.1	BKP57_09480	BKP57_10585	Manganese ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
API92038.1	API93568.1	BKP57_09480	BKP57_18175	Manganese ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
API92038.1	API93569.1	BKP57_09480	BKP57_18180	Manganese ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
API92164.1	API92238.1	BKP57_10170	BKP57_10580	Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
API92164.1	API92239.1	BKP57_10170	BKP57_10585	Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
API92164.1	API92478.1	BKP57_10170	BKP57_12020	Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
API92164.1	API93568.1	BKP57_10170	BKP57_18175	Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
API92164.1	API93569.1	BKP57_10170	BKP57_18180	Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
API92238.1	API92038.1	BKP57_10580	BKP57_09480	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610