STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002000085_00028Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_002000085_00030
Unannotated protein.
 
 0.996
GCA_002000085_00027
Unannotated protein.
 
 
 0.993
GCA_002000085_00029
Unannotated protein.
 0.993
GCA_002000085_00024
Unannotated protein.
 
 0.964
GCA_002000085_00248
Unannotated protein.
    
 0.942
GCA_002000085_01484
Unannotated protein.
    
 0.942
GCA_002000085_01890
Unannotated protein.
    
  0.942
GCA_002000085_03232
Unannotated protein.
   
  0.942
GCA_002000085_03462
Unannotated protein.
   
  0.942
GCA_002000085_01441
Unannotated protein.
    
 0.941
Your Current Organism:
Colwellia agarivorans
NCBI taxonomy Id: 1911682
Other names: C. agarivorans, Colwellia agarivorans Xu et al. 2017, Colwellia sp. QM50, KCTC 52273, MCCC 1H00143, strain QM50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.