STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002000085_00644Unannotated protein. (361 aa)    
Predicted Functional Partners:
GCA_002000085_02742
Unannotated protein.
  
 0.986
GCA_002000085_02859
Unannotated protein.
  
 0.984
GCA_002000085_02020
Unannotated protein.
   
 0.962
GCA_002000085_00071
Unannotated protein.
  
 
 0.955
GCA_002000085_00645
Unannotated protein.
  
  
 0.945
GCA_002000085_03690
Unannotated protein.
     
 0.943
GCA_002000085_02844
Unannotated protein.
  
 
 0.934
GCA_002000085_01672
Unannotated protein.
  
 0.896
GCA_002000085_00298
Unannotated protein.
 
  
 0.885
GCA_002000085_03880
Unannotated protein.
  
  
 0.833
Your Current Organism:
Colwellia agarivorans
NCBI taxonomy Id: 1911682
Other names: C. agarivorans, Colwellia agarivorans Xu et al. 2017, Colwellia sp. QM50, KCTC 52273, MCCC 1H00143, strain QM50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.