STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002005105_01082Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_002005105_01081
Unannotated protein.
 0.998
GCA_002005105_01083
Unannotated protein.
 
 0.997
GCA_002005105_01155
Unannotated protein.
 
 0.997
GCA_002005105_01749
Unannotated protein.
 
 0.997
GCA_002005105_00798
Unannotated protein.
 0.992
GCA_002005105_01748
Unannotated protein.
 0.992
GCA_002005105_00796
Unannotated protein.
 0.977
GCA_002005105_01746
Unannotated protein.
 0.931
GCA_002005105_03578
Unannotated protein.
     
 0.876
GCA_002005105_04666
Unannotated protein.
 
  
 0.873
Your Current Organism:
Methylocaldum sp. 14B
NCBI taxonomy Id: 1912213
Other names: M. sp. 14B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.