STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002005105_03262Unannotated protein. (636 aa)    
Predicted Functional Partners:
GCA_002005105_02558
Unannotated protein.
  
     0.773
GCA_002005105_03805
Unannotated protein.
  
     0.772
GCA_002005105_00774
Unannotated protein.
 
     0.771
GCA_002005105_02557
Unannotated protein.
  
     0.771
GCA_002005105_00658
Unannotated protein.
  
     0.764
GCA_002005105_00678
Unannotated protein.
  
     0.761
GCA_002005105_00791
Unannotated protein.
  
     0.761
GCA_002005105_03804
Unannotated protein.
  
     0.759
GCA_002005105_01006
Unannotated protein.
  
     0.757
GCA_002005105_03409
Unannotated protein.
  
     0.756
Your Current Organism:
Methylocaldum sp. 14B
NCBI taxonomy Id: 1912213
Other names: M. sp. 14B
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.