STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ75172.2Hypothetical protein; High confidence in function and specificity. (106 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
 
    0.842
CDZ75171.1
Putative protein conserved in bacteria; Family membership.
 
    
0.832
yaaT
Stage 0 sporulation protein YaaT; High confidence in function and specificity.
  
    0.824
CDZ75170.2
DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair]; High confidence in function and specificity.
  
    0.823
CDZ75174.1
In molecular biology, group III pyridoxal-dependent decarboxylases are a family of bacterial enzymes comprising ornithine decarboxylase, lysine decarboxylaseand arginine decarboxylase; High confidence in function and specificity.
  
    0.811
CDZ75168.1
Hypothetical protein; High confidence in function and specificity.
       0.668
CDZ75167.1
Hypothetical protein.
       0.510
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
   
    0.509
ftnB
Nonheme iron-containing ferritin; Iron-storage protein.
       0.502
CDZ74315.1
DHH subfamily 1 protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
  
 0.435
Your Current Organism:
Peptoniphilus sp. ING2D1G
NCBI taxonomy Id: 1912856
Other names: P. sp. ING2-D1G, Peptoniphilus sp. ING2-D1G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.