STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ75384.1Hypothetical protein; Family membership. (177 aa)    
Predicted Functional Partners:
rbr
Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [PMID: 7830612], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin [PMID: 1657933]. The physiological role of Rr has not been identified; High confidence in function and specificity.
       0.536
CDZ75381.1
Hypothetical protein.
       0.536
CDZ75382.2
Hypothetical protein.
       0.536
CDZ75383.1
Radical SAM domain protein; High confidence in function and specificity.
       0.536
CDZ75385.1
Hypothetical protein; Family membership.
       0.473
CDZ74232.1
Putative DNA replication protein DnaD; This entry represents a domain found in several bacterial replication initiation and membrane attachment proteins, DnaB and DnaD.The DnaD protein is a component of the PriA primosome. The PriA primosome functions to recruit the replication fork helicase onto the DNA. Members, both chromosomal or phage-associated, are found in the Bacillus/Clostridium group of Gram-positive bacteria; High confidence in function and specificity.
  
     0.406
Your Current Organism:
Peptoniphilus sp. ING2D1G
NCBI taxonomy Id: 1912856
Other names: P. sp. ING2-D1G, Peptoniphilus sp. ING2-D1G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.