STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE88654.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
AKE88657.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.767
AKE88656.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.764
AKE90182.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.745
AKE92561.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.711
AKE88655.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.709
AKE90095.1
Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
AKE91196.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
AKE88682.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.673
AKE90096.1
Hemin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.673
AKE91197.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.673
Your Current Organism:
Rhodococcus aetherivorans
NCBI taxonomy Id: 191292
Other names: DSM 44752, JCM 14343, NCIMB 13964, R. aetherivorans, Rhodococcus aetherivorans Goodfellow et al. 2004, Rhodococcus sp. BCP1, Rhodococcus sp. IAR1, strain 10bc312
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