STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE89114.1Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (424 aa)    
Predicted Functional Partners:
AKE89115.1
Peptidase M75; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
AKE89116.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
AKE92419.1
Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
AKE87901.1
Copper metallochaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.780
AKE92264.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.741
AKE88357.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.635
AKE90797.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.635
AKE91219.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.561
tatA
Preprotein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.494
tatA-2
Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.494
Your Current Organism:
Rhodococcus aetherivorans
NCBI taxonomy Id: 191292
Other names: DSM 44752, JCM 14343, NCIMB 13964, R. aetherivorans, Rhodococcus aetherivorans Goodfellow et al. 2004, Rhodococcus sp. BCP1, Rhodococcus sp. IAR1, strain 10bc312
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