STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE91567.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.970
AKE91568.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.905
AKE92280.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.735
AKE92231.1
Glycoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.730
AKE91012.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
AKE92533.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
AKE88116.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.727
AKE88126.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.720
AKE88125.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.690
AKE90551.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
Your Current Organism:
Rhodococcus aetherivorans
NCBI taxonomy Id: 191292
Other names: DSM 44752, JCM 14343, NCIMB 13964, R. aetherivorans, Rhodococcus aetherivorans Goodfellow et al. 2004, Rhodococcus sp. BCP1, Rhodococcus sp. IAR1, strain 10bc312
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