STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE92182.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)    
Predicted Functional Partners:
AKE92185.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.987
AKE92186.1
Toluene hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.986
AKE92188.1
Methane monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.977
AKE92184.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.975
AKE92183.1
Metal-sulfur cluster biosynthetic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.973
AKE92187.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.973
AKE89379.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.947
AKE91917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
AKE92181.1
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
   
 
 0.750
AKE92189.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.677
Your Current Organism:
Rhodococcus aetherivorans
NCBI taxonomy Id: 191292
Other names: DSM 44752, JCM 14343, NCIMB 13964, R. aetherivorans, Rhodococcus aetherivorans Goodfellow et al. 2004, Rhodococcus sp. BCP1, Rhodococcus sp. IAR1, strain 10bc312
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