STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF17475.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
OLF17451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.853
OLF13420.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.711
OLF17474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.579
OLF17556.1
Cysteine desulfurase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
OLF17472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
OLF17471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.520
OLF17473.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
OLF17470.1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.454
OLF17476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.404
Your Current Organism:
Actinophytocola xanthii
NCBI taxonomy Id: 1912961
Other names: A. xanthii, Actinophytocola sp. 11-183, Actinophytocola sp. KCTC 39690, Actinophytocola sp. MCCC 1K02062, Actinophytocola xanthii Wang et al. 2017, KCTC 39690, MCCC 1K02062, strain 11-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.