STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMH40102.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)    
Predicted Functional Partners:
OMH40098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OMH40099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.773
purM
Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OMH40094.1
Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OMH40095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OMH40096.1
Tol-pal system protein YbgF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OMH40097.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
      0.627
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
       0.448
Your Current Organism:
Desulfurobacterium indicum
NCBI taxonomy Id: 1914305
Other names: D. indicum, DSM 101677, Desulfurobacterium indicum Cao et al. 2017, Desulfurobacterium sp. K6013, MCCC 1A01868, strain K6013
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