STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002094885_01784Unannotated protein. (400 aa)    
Predicted Functional Partners:
GCA_002094885_02233
Unannotated protein.
 
 
 0.749
GCA_002094885_01424
Unannotated protein.
  
 
  0.686
GCA_002094885_02235
Unannotated protein.
  
 
  0.685
GCA_002094885_01427
Unannotated protein.
  
  
  0.684
GCA_002094885_01425
Unannotated protein.
  
  
  0.680
GCA_002094885_00044
Unannotated protein.
  
 
 0.653
GCA_002094885_01557
Unannotated protein.
  
 
 0.653
GCA_002094885_02294
Unannotated protein.
    
 0.642
GCA_002094885_02234
Unannotated protein.
  
  
  0.631
GCA_002094885_00759
Unannotated protein.
    
  0.584
Your Current Organism:
Rhodobacteraceae bacterium WDS1C4
NCBI taxonomy Id: 1914408
Other names: R. bacterium WDS1C4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.