STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002094885_02775Unannotated protein. (475 aa)    
Predicted Functional Partners:
GCA_002094885_02294
Unannotated protein.
 
     0.851
GCA_002094885_01095
Unannotated protein.
    
  0.815
GCA_002094885_02776
Unannotated protein.
       0.676
GCA_002094885_02774
Unannotated protein.
       0.654
GCA_002094885_00502
Unannotated protein.
    
 0.610
GCA_002094885_01375
Unannotated protein.
    
 0.607
GCA_002094885_00571
Unannotated protein.
    
 0.600
GCA_002094885_01193
Unannotated protein.
     
 0.570
GCA_002094885_00494
Unannotated protein.
    
  0.565
GCA_002094885_02832
Unannotated protein.
    
  0.560
Your Current Organism:
Rhodobacteraceae bacterium WDS1C4
NCBI taxonomy Id: 1914408
Other names: R. bacterium WDS1C4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.