STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS62277.1DeoR family transcriptional regulator. (254 aa)    
Predicted Functional Partners:
ANS65852.1
Fructose-specific permease.
 
  
 0.835
ANS65652.1
Putative PTS mannose-specific enzyme IIBCA component.
 
  
 0.831
ANS65853.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.804
ANS66093.1
Sugar kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.789
ANS62274.1
Type III effector Hrp-dependent outer.
  
  
 0.476
ANS62276.1
2-keto-3-deoxygluconate permease.
       0.475
ANS65372.1
Myo-inositol catabolism protein.
  
  
 0.418
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.