Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANS62369.1Transposase IS4 family protein. (60 aa)    
Predicted Functional Partners:
ANS65451.1
Hypothetical protein.
  
     0.653
ANS66773.1
Hypothetical protein.
  
     0.584
ANS62368.1
Putative beta-lactamase.
       0.551
ANS70675.1
Putative transposase.
 
     0.543
ANS62958.1
Transposase.
 
   
 0.524
ANS62366.1
Beta-lactamase.
 
     0.463
ANS70646.1
Hypothetical protein.
  
     0.452
ANS66681.1
Hypothetical protein.
  
     0.450
ANS68287.1
Hypothetical protein.
  
     0.444
ANS65450.1
Two component system histidine kinase.
  
     0.423
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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