STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS62425.1Peptidoglycan-binding domain 1 protein. (444 aa)    
Predicted Functional Partners:
ANS62423.1
Hypothetical protein.
 
     0.969
ANS62424.1
ABC transporter related protein.
 
    0.885
ANS62426.1
Hypothetical protein.
       0.822
ANS62428.1
Putative two-component system sensor kinase.
 
     0.709
ANS62427.1
Putative two-component system response regulator.
  
    0.570
ANS67885.1
Peptidoglycan binding domain-containing protein.
  
     0.567
ANS70386.1
Hypothetical protein.
  
     0.503
ANS66613.1
Hypothetical protein.
  
     0.497
ANS70513.1
Celulase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
    0.416
ANS70514.1
Endoglucanase B.
  
     0.415
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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