STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS62879.1Arabinogalactan endo-1,4-beta-galactosidase, putative. (649 aa)    
Predicted Functional Partners:
ANS62880.1
Carbohydrate binding family 6.
 
  
 0.741
ANS62881.1
Pectate lyase.
 
    0.646
ANS62878.1
Hypothetical protein.
 
     0.626
ANS70317.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.624
ANS70502.1
Endoglucanase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.619
ANS64779.1
Hypothetical protein.
  
   
 0.612
ANS70561.1
Hypothetical protein.
  
  
 0.592
ANS68865.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.588
ANS70501.1
Carbohydrate binding family 6 protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.587
ANS63447.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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