STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS62963.1Glycosyl hydrolase. (577 aa)    
Predicted Functional Partners:
ANS66087.1
Trehalose-phosphate synthase.
 
   
 0.759
ANS69137.1
Mandalate racemase.
 
     0.716
ANS69135.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.645
ANS62966.1
Non-ribosomal peptide synthetase.
       0.563
ANS62964.1
Putative cytochrome P450.
       0.559
ANS62965.1
Hypothetical protein.
       0.559
ANS66088.1
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
   
 0.514
ANS62967.1
Non-ribosomal peptide synthase/amino acid adenylation enzyme.
       0.474
ANS62968.1
Actinomycin synthetase II.
       0.474
ANS62969.1
L-threonine synthase.
       0.474
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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