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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS63003.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
ANS63002.1
Transmembrane efflux protein.
 
    0.846
ANS67319.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.553
ANS70705.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.545
ANS63351.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.541
ANS64965.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.510
ANS64039.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.508
ANS62358.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.482
ANS68171.1
Transcriptional regulator.
  
   0.441
ANS62761.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.408
ANS70078.1
Integral membrane protein.
  
     0.403
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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