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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS63023.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
ANS63024.1
Hypothetical protein.
 
  
 0.955
ANS63026.1
Aspartate ammonia-lyase.
       0.714
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.674
ANS63027.1
L-asparaginase II.
       0.670
ANS63029.1
L-asparagine operon repressor.
       0.654
ANS67296.1
Integral membrane protein.
  
   
 0.595
glsA
Glutaminase; Belongs to the glutaminase family.
       0.562
ANS66544.1
Ion channel membrane protein.
  
     0.524
ANS69883.1
Hypothetical protein.
  
     0.506
ANS69041.1
Regulatory protein.
  
     0.480
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.