STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS63248.1L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (489 aa)    
Predicted Functional Partners:
ANS63246.1
Hypothetical protein.
 
     0.907
ANS63247.1
Inositol transport protein.
 
     0.848
ANS63323.1
Alpha-N-arabinofuranosidase.
  
 
 0.837
ANS64994.1
alpha-L-arabinofuranosidase.
  
 
 0.837
ANS70501.1
Carbohydrate binding family 6 protein; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.836
ANS63777.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.821
ANS68845.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.821
ANS70411.1
Xylosidase glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.821
ANS70503.1
Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.821
ANS64402.1
Hypothetical protein.
     
  0.800
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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