Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANS63496.1ABC transporter. (593 aa)    
Predicted Functional Partners:
ANS63494.1
ABC transporter transmembrane subunit.
 
   
0.860
ANS63495.1
Lipoprotein.
       0.540
ANS66427.1
ABC transporter ATP-binding protein.
  
  0.482
ANS63493.1
Hypothetical protein.
       0.452
ANS64199.1
ATPase.
 
 
 0.451
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.451
dnaK-2
Heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.450
ANS63056.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 0.436
ANS69152.1
ABC transporter ATP-binding protein.
 
 
 0.430
ANS63492.1
DAACS family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
   
 
 0.424
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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