STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS63824.1Antagonist of KipI. (289 aa)    
Predicted Functional Partners:
ANS63823.1
Antagonist of KipI.
 
 0.999
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.993
ANS64064.1
Urea amidolyase.
 
0.989
ANS63821.1
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.965
ANS67529.1
acyl-CoA carboxylase, alpha subunit.
 
 
 0.861
ANS64065.1
Amidase.
   
 0.845
ANS65420.1
Acetyl/propionyl CoA carboxylase alpha subunit.
 
 
 0.845
ANS66006.1
Acetyl/propionyl CoA carboxylase alpha subunit.
 
 
 0.833
ANS63820.1
Transmembrane efflux protein.
       0.781
ANS63819.1
GntR-family transcriptional regulator.
       0.705
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.