Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANS64000.1ABC transporter protein, integral membrane subunit. (285 aa)    
Predicted Functional Partners:
ANS64001.1
ABC transport protein.
 
 
 0.988
ANS64002.1
Lipoprotein.
  
 0.979
ANS64003.1
Solute-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.976
ANS65120.1
ABC-transporter metal-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.893
ANS65121.1
Metal transport ABC transporter.
 
 
 0.875
ANS64004.1
Secreted protein.
 
  
 0.874
ANS63268.1
ChaT3 protein.
  
 
 0.837
ANS63267.1
ChaT2 protein.
 
  
 0.685
ANS65167.1
Lipoprotein.
  
  
 0.544
ANS65122.1
Metal transport ABC transporter.
  
  
 
0.524
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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