Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANS64007.1Carboxymuconolactone decarboxylase. (159 aa)    
Predicted Functional Partners:
ANS69356.1
3-carboxymuconate cycloisomerase.
 
 
 0.944
ANS69022.1
3-oxoadipate enol-lactone hydrolase.
 
 
0.716
ANS69354.1
3-oxoadipate enol-lactone hydrolase.
 
 
0.715
ANS69687.1
Hypothetical protein.
 
 
 0.702
ANS64006.1
AraC family transcriptional regulator.
     
 0.660
ANS62901.1
Alpha/beta hydrolase fold protein.
  
 
 0.659
ANS70195.1
MerR family transcriptional regulator.
 
     0.583
ANS63342.1
Hypothetical protein.
 
   
 0.579
ANS64950.1
MerR family transcriptional regulator.
 
     0.567
ANS69355.1
Protocatechuate 3,4-dioxygenase alpha subunit.
 
  
 0.449
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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